Facilities at BioIT Lab
The Dr Singh's BioIT lab offers various facilities, Including Biosafety Lavel 2 Facility, Data Science Facility, Computational Structural Biology, and NGS Data Analysis
Biosafety Lavel 2 Facility
Antibiotic Susceptibility Test (Ast): BioIT lab has established AST facility for culturable bacterial strains of BSL2 level organisms.
Data Science Facility
Advanced Statistical Analysis: Dr Singh's BioIT has computational facility to deliver advanced statistical analysis on demand.
We covers:
Sample Size Calculations
Hypothesis Testing
AUC/ROC Analysis
Correlation and Regression Analysis
Meta-analysis and Network Meta-analysis
Computational Structural Biology
Computer Aided Drug Discovery: Dr Singh's BioIT has advance GPU-accelerated workstation dedicated for CADD and Molecular modeling.
We covers:
Virtual Screenings (SBVS and LBVS)
Molecular Dynamics Simulations
Meta-dynamics Simulation
Umbrella Sampling
Trajectory Analysis
Free energy calculations (MM/PBSA and FEL)
NGS Data Analysis
Genomics Data Analysis: Dr Singh's BioIT has dedicated workstation for NGS data analysis.
We covers:
Single Neucleotide Polymorphism (SNP)/SNV Analysis
RNA-Seq data analysis
Mutation Annotated File plotting
Gene Ontology/Pathway Enrichment Analysis
Software Dovelopment
Automation of workfolw: Dr Singh's BioIT has great vision to automate the complex computational workflows for e.g. MD simulations, Trajectory Analysis, Free energy calculations.
In-house developed softwares
gmx_qk: for MD simulations, Trajectory Analysis and free energy calculations
GitHub repository Download Now PublicationWarabandi: to calculate the roster for irrigational regulation of seven days in Rajasthan
CRAN repository